git cl presubmit and the presubmit trybot are failing for this CL: https://crrev.com/c/739561/8
I removed a Java class and also removed it from the build file but java_checker is still trying to read it.

It looks like this change to java_checker caused the issue:
https://chromium.googlesource.com/chromium/buildtools.git/+/b0f94d04e26f1cdaf4d2357e0f9eeaffa894b872

Reverting the CL locally seems to fix the problem. Please take a look at this issue.

Traceback (most recent call last):
  File "/SOME_PATH/depot_tools/git_cl.py", line 6125, in <module>
    sys.exit(main(sys.argv[1:]))
  File "/SOME_PATH/depot_tools/git_cl.py", line 6107, in main
    return dispatcher.execute(OptionParser(), argv)
  File "/SOME_PATH/depot_tools/subcommand.py", line 252, in execute
    return command(parser, args[1:])
  File "/SOME_PATH/depot_tools/git_cl.py", line 4764, in CMDpresubmit
    change=cl.GetChange(base_branch, None))
  File "/SOME_PATH/depot_tools/git_cl.py", line 1576, in RunHook
    gerrit_obj=self._codereview_impl.GetGerritObjForPresubmit())
  File "/SOME_PATH/depot_tools/presubmit_support.py", line 1364, in DoPresubmitChecks
    results += executer.ExecPresubmitScript(presubmit_script, filename)
  File "/SOME_PATH/depot_tools/presubmit_support.py", line 1274, in ExecPresubmitScript
    result = eval(function_name + '(*__args)', context)
  File "<string>", line 1, in <module>
  File "<string>", line 2749, in CheckChangeOnCommit
  File "<string>", line 2441, in _CommonChecks
  File "<string>", line 894, in _CheckUnwantedDependencies
  File "/SOME_PATH/chromium/src/buildtools/checkdeps/checkdeps.py", line 166, in CheckAddedJavaImports
    added_imports))
  File "/SOME_PATH/chromium/src/buildtools/checkdeps/java_checker.py", line 45, in __init__
    added_classset = self._PrescanImportFiles(added_imports)
  File "/SOME_PATH/chromium/src/buildtools/checkdeps/java_checker.py", line 98, in _PrescanImportFiles
    full_class_name = self._GetClassFullName(filepath)
  File "/SOME_PATH/chromium/src/buildtools/checkdeps/java_checker.py", line 50, in _GetClassFullName
    with codecs.open(filepath, encoding='utf-8') as f:
  File "/usr/lib/python2.7/codecs.py", line 878, in open
    file = __builtin__.open(filename, mode, buffering)
IOError: [Errno 2] No such file or directory: '/SOME_PATH/chromium/src/chrome/android/java/src/org/chromium/chrome/browser/preferences/privacy/ClearBrowsingDataPreferencesTab.java'